Metadata for rockhopper in main

---
Type: desktop-application
ID: edu.wellesley.cs.rockhoppergui
Package: rockhopper
ProjectLicense: GPL-3.0-or-later
Name:
  C: rockhoppergui
Summary:
  C: System for analyzing bacterial RNA-seq data
Description:
  C: >-
    <p>Rockhopper is a comprehensive and user-friendly system for computational analysis of bacterial RNA-seq data. As input, Rockhopper
    takes RNA sequencing reads output by high-throughput sequencing technology (FASTQ, QSEQ, FASTA, SAM, or BAM files). Rockhopper supports
    the following tasks:
    
    Reference based transcript assembly (when one or more reference genomes are available)Aligning reads to genomesAssembling
    transcriptsIdentifying transcript boundaries and novel transcripts such as small RNAsDe novo transcript assembly (when reference genomes
    are unavailable)Normalizing data from different experimentsQuantifying transcript abundanceTesting for differential gene expressionCharacterizing
    operon structuresVisualizing results in a genome browser</p>
Categories:
- Science
- Biology
- DataVisualization
Keywords:
  C:
  - genomics
  - bacterial
  - RNA
  - visualization
Icon:
  cached:
  - name: rockhopper_rockhopper.png
    width: 48
    height: 48
  - name: rockhopper_rockhopper.png
    width: 64
    height: 64
  stock: rockhopper
Launchable:
  desktop-id:
  - rockhoppergui.desktop
ContentRating:
  oars-1.0: {}