⇦ | artemis [main]
Last updated on: 2021-11-28 20:16 [UTC]

Metadata for artemis in main

io.github.sanger_pathogens.artemis.art - 18.1.0+dfsg-6 ⚙ all

Icon
---
Type: desktop-application
ID: io.github.sanger_pathogens.artemis.art
Package: artemis
Name:
  C: art
Summary:
  C: Artemis genome browser and annotation tool
Description:
  C: >-
    <p>
          Artemis is a free genome browser and annotation tool that allows visualisation of sequence features, next generation
    data and the results of analyses within the context of the sequence, and also its six-frame translation.
        </p>
    <p>
          Artemis is written in Java, and is available for UNIX, Macintosh and Windows systems. It can read EMBL and GENBANK
    database entries or sequence in FASTA, indexed FASTA or raw format. Other sequence features can be in EMBL, GENBANK or
    GFF format.
        </p>
ProjectLicense: GPL-3.0-only
Categories:
- Science
- Biology
- DataVisualization
Keywords:
  C:
  - genomics
Icon:
  cached:
  - name: artemis_helix.png
    width: 48
    height: 48
  - name: artemis_helix.png
    width: 64
    height: 64
  stock: helix
Launchable:
  desktop-id:
  - art.desktop
ContentRating:
  oars-1.0: {}

io.github.sanger_pathogens.artemis.act - 18.1.0+dfsg-6 ⚙ all

Icon
---
Type: desktop-application
ID: io.github.sanger_pathogens.artemis.act
Package: artemis
Name:
  C: act
Summary:
  C: Artemis comparison tool for genome sequences
Description:
  C: >-
    <p>
          ACT is a free tool for displaying pairwise comparisons between two or more DNA sequences.
        </p>
    <p>
          It can be used to identify and analyse regions of similarity and difference between genomes and to explore conservation
    of synteny, in the context of the entire sequences and their annotation.
        </p>
ProjectLicense: GPL-3.0-only
Categories:
- Science
- Biology
- DataVisualization
Keywords:
  C:
  - genomics
Icon:
  cached:
  - name: artemis_helix.png
    width: 48
    height: 48
  - name: artemis_helix.png
    width: 64
    height: 64
  stock: helix
Launchable:
  desktop-id:
  - act.desktop
ContentRating:
  oars-1.0: {}

io.github.sanger_pathogens.artemis.bamview - 18.1.0+dfsg-6 ⚙ all

Icon
---
Type: desktop-application
ID: io.github.sanger_pathogens.artemis.bamview
Package: artemis
Name:
  C: bamview
Summary:
  C: standalone file viewer for genome sequencing data
Description:
  C: >-
    <p>
          BamView is an interactive Java application for visualising read-alignment data stored in BAM or CRAM files.
        </p>
ProjectLicense: GPL-3.0-only
Categories:
- Science
- Biology
- DataVisualization
Keywords:
  C:
  - genomics
Icon:
  cached:
  - name: artemis_helix.png
    width: 48
    height: 48
  - name: artemis_helix.png
    width: 64
    height: 64
  stock: helix
Launchable:
  desktop-id:
  - bamview.desktop
ContentRating:
  oars-1.0: {}

io.github.sanger_pathogens.artemis.dnaplotter - 18.1.0+dfsg-6 ⚙ all

Icon
---
Type: desktop-application
ID: io.github.sanger_pathogens.artemis.dnaplotter
Package: artemis
Name:
  C: dnaplotter
Summary:
  C: generator of images of circular and linear DNA maps
Description:
  C: >-
    <p>
          DNAPlotter can be used to generate images of circular and linear DNA maps to display regions and features of interest.
    The images can be inserted into a document or printed out directly.
        </p>
    <p>
          As this uses Artemis, it can read in the common file formats EMBL, GenBank and GFF3.
        </p>
ProjectLicense: GPL-3.0-only
Categories:
- Science
- Biology
- DataVisualization
Keywords:
  C:
  - genomics
Icon:
  cached:
  - name: artemis_helix.png
    width: 48
    height: 48
  - name: artemis_helix.png
    width: 64
    height: 64
  stock: helix
Launchable:
  desktop-id:
  - dnaplotter.desktop
ContentRating:
  oars-1.0: {}