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org.openchemistry.Avogadro2 - 1.101.0-1 ⚙ amd64 ⚙ arm64 ⚙ armhf ⚙ i386 ⚙ ppc64el ⚙ riscv64 ⚙ s390x

Icon
---
Type: desktop-application
ID: org.openchemistry.Avogadro2
Package: avogadro
ProjectLicense: BSD-3-Clause
Name:
  C: Avogadro
Summary:
  C: Advanced molecular editor
Description:
  C: >-
    <p>
          Avogadro is an advanced molecular editor designed for cross-platform use
          in computational chemistry, molecular modeling, bioinformatics, materials
          science, and related areas. It offers flexible rendering and a powerful
          plugin architecture.
        </p>
    <p>
          Core features and goals of the Avogadro project include:
        </p>
    <ul>
      <li>Open-source, distributed under the liberal 3-clause BSD license</li>
      <li>Cross-platform, with nightly builds on Linux, Mac OS X and Windows</li>
      <li>An intuitive interface designed to be useful to whole community</li>
      <li>Fast and efficient, embracing the latest technologies</li>
      <li>Extensible, making extensive use of a plugin architecture</li>
      <li>Flexible, supporting a range of chemical data formats and packages</li>
    </ul>
ProjectGroup: Open Chemistry
Developer:
  id: cc.avogadro
  name:
    C: The Avogadro team
Categories:
- Science
- Chemistry
- Physics
- Education
Url:
  homepage: https://two.avogadro.cc/
  help: https://two.avogadro.cc/docs
  translate: https://hosted.weblate.org/engage/avogadro/
  bugtracker: https://github.com/OpenChemistry/avogadrolibs/issues
  faq: https://discuss.avogadro.cc/
  donation: https://opencollective.com/open-chemistry
Icon:
  cached:
  - name: avogadro_org.openchemistry.Avogadro2.png
    width: 48
    height: 48
  - name: avogadro_org.openchemistry.Avogadro2.png
    width: 64
    height: 64
  - name: avogadro_org.openchemistry.Avogadro2.png
    width: 128
    height: 128
  remote:
  - url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/icons/128x128/avogadro_org.openchemistry.Avogadro2.png
    width: 128
    height: 128
  stock: org.openchemistry.Avogadro2
Launchable:
  desktop-id:
  - org.openchemistry.Avogadro2.desktop
Recommends:
- control: keyboard
- control: pointing
- display_length: 768
Provides:
  mediatypes:
  - chemical/x-cml
  - chemical/x-xyz
Screenshots:
- default: true
  thumbnails:
  - url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-1_752x542@1.png
    width: 752
    height: 542
  - url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-1_624x449@1.png
    width: 624
    height: 449
  - url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-1_224x161@1.png
    width: 224
    height: 161
  source-image:
    url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-1_orig.png
    width: 1097
    height: 791
- thumbnails:
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    width: 752
    height: 607
  - url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-2_624x503@1.png
    width: 624
    height: 503
  - url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-2_224x180@1.png
    width: 224
    height: 180
  source-image:
    url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-2_orig.png
    width: 1246
    height: 1006
- thumbnails:
  - url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-3_224x179@1.png
    width: 224
    height: 179
  source-image:
    url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-3_orig.png
    width: 500
    height: 400
- thumbnails:
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    height: 998
  - url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-4_752x601@1.png
    width: 752
    height: 601
  - url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-4_624x499@1.png
    width: 624
    height: 499
  - url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-4_224x179@1.png
    width: 224
    height: 179
  source-image:
    url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-4_orig.png
    width: 1860
    height: 1488
- thumbnails:
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    height: 499
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    width: 224
    height: 179
  source-image:
    url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-5_orig.png
    width: 625
    height: 500
- thumbnails:
  - url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-6_224x179@1.png
    width: 224
    height: 179
  source-image:
    url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-6_orig.png
    width: 500
    height: 400
- thumbnails:
  - url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-7_224x179@1.png
    width: 224
    height: 179
  source-image:
    url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-7_orig.png
    width: 565
    height: 452
- thumbnails:
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    width: 1248
    height: 998
  - url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-8_752x601@1.png
    width: 752
    height: 601
  - url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-8_624x499@1.png
    width: 624
    height: 499
  - url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-8_224x179@1.png
    width: 224
    height: 179
  source-image:
    url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-8_orig.png
    width: 1500
    height: 1200
- thumbnails:
  - url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-9_224x179@1.png
    width: 224
    height: 179
  source-image:
    url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-9_orig.png
    width: 500
    height: 400
- thumbnails:
  - url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-10_224x179@1.png
    width: 224
    height: 179
  source-image:
    url: org/openchemistry/Avogadro2/9380dd7b7cda2af83997d05e0b98d274/screenshots/image-10_orig.png
    width: 500
    height: 400
Branding:
  colors:
  - type: primary
    scheme-preference: light
    value: "#00bdeb"
  - type: primary
    scheme-preference: dark
    value: "#00bdeb"
Releases:
- version: 1.100.0
  type: stable
  unix-timestamp: 1737417600
  description:
    C: >-
      <p>Highlights</p>
      
      <ul>
        <li>New rendering options, including depth-of-field blur and fog from @perminder-17</li>
        <li>Faster surface mesh generation using the flying edges algorithm @perminder-17</li>
        <li>Brought back the “molecular orbitals” panel @ghutchis</li>
        <li>Support for translucent balls-and-sticks, van der Waals spheres, and licorice rendering including per-layer customization @ghutchis</li>
        <li>New, improved Flatpak package from @matterhorn103 including support for ARM</li>
        <li>New conformer properties window @ghutchis</li>
        <li>New improved molecular properties window, including charge and spin multiplicity, HOMO and LUMO energies, total energies and other
      properties (depending on file format) @ghutchis</li>
        <li>Many more properties parsed from ORCA output files including Hirshfeld, MBIS, and CHELPG charges @ghutchis</li>
        <li>Code signing on Windows to minimize Defender warnings @ghutchis thanks to SignPath</li>
        <li>Support for latest Qt6 on Linux @matterhorn103</li>
      </ul>
  url:
    details: https://two.avogadro.cc/install/versions/v1100.html
- version: 1.99.0
  type: stable
  unix-timestamp: 1707523200
  description:
    C: >-
      <p>Highlights</p>
      
      <ul>
        <li>Further improvements to the new optimization framework, including default integrated Open Babel force fields (MMFF94, UFF, GAFF)</li>
        <li>New toolbar icons with light / dark theme from @matterhorn103</li>
        <li>Significantly faster molecular and orbital surfaces</li>
        <li>Vibrational spectra plotting</li>
        <li>Support for installing Python packages with plugins via pip or conda</li>
        <li>Improved selection of conda environments</li>
        <li>Conformer search dialog through Open Babel</li>
        <li>Improved template tool for inserting ligands and functional groups</li>
        <li>Significant improvements from @nbehrnd for the ligand library</li>
        <li>Logging debugging / error messages to a file for Windows users</li>
      </ul>
  url:
    details: https://two.avogadro.cc/install/versions/v199.html
- version: 1.98.1
  type: stable
  unix-timestamp: 1698883200
  description:
    C: >-
      <p>This is a bug-fix release, particularly for Windows users, removing a filename filter that affected opening and saving files.</p>
      
      <p>This also includes the openbabel-3.dll which was left out of Windows releases.</p>
  url:
    details: https://two.avogadro.cc/install/versions/v1981.html
- version: 1.98.0
  type: stable
  unix-timestamp: 1698364800
  description:
    C: >-
      <p>Highlights</p>
      
      <ul>
        <li>Integration with 3Dconnexion input devices on Mac and Windows</li>
        <li>Improved rendering including ambient occlusion and real-time shadows</li>
        <li>New template tool for assembly of inorganic complexes and ligands or attaching functional groups (e.g, “click to add phenyl group”)
      (#1075)</li>
        <li>New forcefield framework supporting external Python scripts (e.g., XTB, ASE, ANI-2x, etc.) (#1370)</li>
        <li>Better perception of bond orders</li>
        <li>Align tool (#1364)</li>
        <li>Manual translate / rotate dialog</li>
        <li>Fetch molecule names from PubChem, including markup</li>
        <li>Commands to create centroid and center-of-mass points</li>
        <li>Improved “fill unit cell” (#1375)</li>
        <li>Preview images of insert molecule fragments and import crystals</li>
        <li>Build improvements, including initial support for Qt6 and VTK9 fixes @cryos</li>
        <li>Integrated Orca ouputfile support (from Orca-enhanced Avogadro) (#1326)</li>
        <li>Add a generic compchem output reader (i.e., should automatically handle .out and .log files) (#1347)</li>
        <li>Initial scripting support (e.g., used to generate preview images through a directory) (#1344)</li>
        <li>Several updated toolbar icons</li>
      </ul>
  url:
    details: https://two.avogadro.cc/install/versions/v198.html
ContentRating:
  oars-1.1: {}